Difference between revisions of "Software"
m |
|||
| Line 23: | Line 23: | ||
* [http://cheynelab.utoronto.ca/brainwave Brainwave] (free) and [http://cheynelab.utoronto.ca/httpdoc/Brainwave_v3.1_Documentation_6October_2015_final.pdf documentation] - MEG analysis toolbox | * [http://cheynelab.utoronto.ca/brainwave Brainwave] (free) and [http://cheynelab.utoronto.ca/httpdoc/Brainwave_v3.1_Documentation_6October_2015_final.pdf documentation] - MEG analysis toolbox | ||
* [http://brainvis.wustl.edu/wiki/index.php/Caret:Download CARET] (free) - anatomical reconstruction toolkit for structural and anatomical data ([http://prefrontal.org/blog/2009/04/using-caret-for-fmri-visualization/ simple tutorial]) | * [http://brainvis.wustl.edu/wiki/index.php/Caret:Download CARET] (free) - anatomical reconstruction toolkit for structural and anatomical data ([http://prefrontal.org/blog/2009/04/using-caret-for-fmri-visualization/ simple tutorial]) | ||
| + | * [http://neurosynth.org/ Atlas for identifying brain regions / function] based on fMRI meta-analyses | ||
== Machine Learning == | == Machine Learning == | ||
Revision as of 19:29, 10 January 2017
This page contains useful information about research software used in the lab.
Contents
General useful software
- Total Commander (free) - file manager
- WinSCP (free) - file transfer tool
- TeXnicCenter (free) - LateX editor
- Mendeley reference manager (free) - manage references & automatic bibliography generator for MSWord, LibreOffice and BibTeX
- SeaMonkey (free) - internet application suite including web editor
Vector graphics
Statistics
- SPSS - general purpose
- R (free) - general purpose with great online book!
- psignifit (free) - psychometric function fitting
Imaging analysis
- SPM (free) - general purpose (fMRI oriented)
- PDC (free) - partially directed coherence analysis
- FieldTrip (free) - general purpose (EEG/MEG oriented)
- Brainwave (free) and documentation - MEG analysis toolbox
- CARET (free) - anatomical reconstruction toolkit for structural and anatomical data (simple tutorial)
- Atlas for identifying brain regions / function based on fMRI meta-analyses
Machine Learning
- Kevin Murphy's Kalman filter toolbox (free)
- libSVM - Support Vector Machine Library
- Andrew Ng's ML Programming Exercises
