Software: Difference between revisions
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This page contains useful information about research software used in the lab. | This page contains useful information about research software used in the lab. | ||
== General | == General == | ||
* [http://www.ghisler.com/ Total Commander] (free) - file manager | * [http://www.ghisler.com/ Total Commander] (free) - file manager | ||
* [https://winscp.net/eng/index.php WinSCP] (free) - file transfer tool | * [https://winscp.net/eng/index.php WinSCP] (free) - file transfer tool | ||
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* [https://git-scm.com/ Git] (free) - version control software and [[Media:Canada-git-presentation_Dmytro.pdf | Dmytro's tutorial]] | * [https://git-scm.com/ Git] (free) - version control software and [[Media:Canada-git-presentation_Dmytro.pdf | Dmytro's tutorial]] | ||
== Imaging Analysis == | |||
== Imaging | |||
* [http://www.fil.ion.ucl.ac.uk/spm/ SPM] (free) - general purpose (fMRI oriented) | * [http://www.fil.ion.ucl.ac.uk/spm/ SPM] (free) - general purpose (fMRI oriented) | ||
* [http://www.lcs.poli.usp.br/~baccala/pdc/CRCBrainConnectivity/AsympPDC/ PDC] (free) - partially directed coherence analysis | * [http://www.lcs.poli.usp.br/~baccala/pdc/CRCBrainConnectivity/AsympPDC/ PDC] (free) - partially directed coherence analysis | ||
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*[http://www.csie.ntu.edu.tw/~cjlin/libsvm/oldfiles/index-1.0.html libSVM] - Support Vector Machine Library | *[http://www.csie.ntu.edu.tw/~cjlin/libsvm/oldfiles/index-1.0.html libSVM] - Support Vector Machine Library | ||
*[https://github.com/merwan/ml-class Andrew Ng's ML Programming Exercises] | *[https://github.com/merwan/ml-class Andrew Ng's ML Programming Exercises] | ||
== Vector Graphics == | |||
* [http://www.coreldraw.com/ca/ CorelDraw] - ask Gunnar for installation CD | |||
* [https://inkscape.org/en/ Inkscape] (free) | |||
== Statistics == | |||
* SPSS - general purpose | |||
* [https://www.r-project.org/ R] (free) - general purpose with [http://r4ds.had.co.nz/ great online book]! | |||
* [http://psignifit.sourceforge.net/ psignifit] (free) - psychometric function fitting | |||
Revision as of 19:01, 4 April 2018
This page contains useful information about research software used in the lab.
General
- Total Commander (free) - file manager
- WinSCP (free) - file transfer tool
- TeXnicCenter (free) - LateX editor
- Mendeley reference manager (free) - manage references & automatic bibliography generator for MSWord, LibreOffice and BibTeX
- SeaMonkey (free) - internet application suite including web editor
- Git (free) - version control software and Dmytro's tutorial
Imaging Analysis
- SPM (free) - general purpose (fMRI oriented)
- PDC (free) - partially directed coherence analysis
- FieldTrip (free) - general purpose (EEG/MEG oriented)
- Brainwave (free) and documentation - MEG analysis toolbox
- CARET (free) - anatomical reconstruction toolkit for structural and anatomical data (simple tutorial)
- Atlas for identifying brain regions / function based on fMRI meta-analyses
Machine Learning
- Kevin Murphy's Kalman filter toolbox (free)
- libSVM - Support Vector Machine Library
- Andrew Ng's ML Programming Exercises
Vector Graphics
Statistics
- SPSS - general purpose
- R (free) - general purpose with great online book!
- psignifit (free) - psychometric function fitting
